PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.KJM0J
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 192aa    MW: 21093.4 Da    PI: 7.6041
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.KJM0JgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.4e-11249454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 +h ++Er+RR+++N+ +  Lr+l P+    + k+ + a+i   ++e+Ik+L
  Aradu.KJM0J  2 SHIAVERNRRKQMNEHLKVLRSLTPSF---YIKRGDQASIIGGVIEFIKEL 49
                 89************************9...9******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.95E-12154No hitNo description
PROSITE profilePS5088814.494149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-15167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-12261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-8249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-9455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009913Biological Processepidermal cell differentiation
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MSHIAVERNR RKQMNEHLKV LRSLTPSFYI KRGDQASIIG GVIEFIKELH QVLQALESQK  60
RRKSLSPSPG PSPKALQPAF QQNDSPTGMG GGSFKELGAS CNSSVADVEV KISGSNVILR  120
VISHRIPGQV AKIIAVLEAL SFEVLHLNIS SMEDTVLYHF VVKIGLECEL SLEELAMEVQ  180
QSFCTEAIIT VL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015958606.11e-138PREDICTED: transcription factor MUTE
SwissprotQ9M8K61e-85MUTE_ARATH; Transcription factor MUTE
TrEMBLA0A151U0L61e-107A0A151U0L6_CAJCA; Transcription factor MUTE
STRINGGLYMA15G11130.21e-105(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112523036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.13e-85bHLH family protein